MLOC_8516 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.047331.350981.791381.67936
LEAShoots from the seedlings (10 cm shoot stage)2.823670.8049121.024111.41308
INF1Young developing inflorescences (5mm)0.1615480.3673020.4612120.305681
INF2Developing inflorescences (1-1.5 cm)0.3461110.4139980.383960.450204
ROORoots from the seedlings (10 cm shoot stage)2.734542.343262.300983.04505
NODDeveloping tillers at six leaf stage, 3rd internode15.054813.82221.2108341.3243
CAR5Developing grain, bracts removed (5 DPA)1.831521.931741.465091.85103
CAR15Developing grain, bracts removed (15 DPA)0.3309150.2067990.2019360.64614



CDS Structure of MLOC_8516






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8516.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8516.1CUST_16957_PI427708080AvailableAvailablecontig_143790 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g08160.1 -3 5e-42 154 119/269 (44%) 13112.m00860 protein conserved hypothetical protein
TAIR PP10None-----