MLOC_8516 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.04733 | 1.35098 | 1.79138 | 1.67936 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.82367 | 0.804912 | 1.02411 | 1.41308 |
INF1 | Young developing inflorescences (5mm) | 0.161548 | 0.367302 | 0.461212 | 0.305681 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.346111 | 0.413998 | 0.38396 | 0.450204 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.73454 | 2.34326 | 2.30098 | 3.04505 |
NOD | Developing tillers at six leaf stage, 3rd internode | 15.0548 | 13.8222 | 1.21083 | 41.3243 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.83152 | 1.93174 | 1.46509 | 1.85103 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.330915 | 0.206799 | 0.201936 | 0.64614 |
CDS Structure of MLOC_8516
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8516.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g08160.1 |
-3 |
5e-42 |
154 |
119/269 (44%) |
13112.m00860 protein conserved hypothetical protein |
TAIR PP10 | None | - | - | - | - | - |