MLOC_8487 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_8487_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 5.92361 | 27.7637 | 24.2659 | 22.7893 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 29.0591 | 20.4143 | 13.0465 | 18.9309 |
INF1 | Young developing inflorescences (5mm) | 23.3474 | 21.6326 | 18.0889 | 18.2639 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.533 | 24.2716 | 20.6344 | 26.4514 |
ROO | Roots from the seedlings (10 cm shoot stage) | 5.8539 | 14.0109 | 9.99832 | 16.9534 |
NOD | Developing tillers at six leaf stage, 3rd internode | 16.017 | 17.073 | 8.33466 | 59.7266 |
CAR5 | Developing grain, bracts removed (5 DPA) | 32.1682 | 28.3904 | 31.9813 | 31.9353 |
CAR15 | Developing grain, bracts removed (15 DPA) | 9.30902 | 8.16873 | 9.03766 | 20.8505 |
CDS Structure of MLOC_8487
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8487.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
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Rice PP6 |
LOC_Os02g38480.1 |
+2 |
0.0 |
1493 |
808/1133 (71%) |
13102.m04234 protein expressed protein |
TAIR PP10 |
AT1G24460.2 |
+2 |
2e-103 |
362 |
330/1181 (28%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1). | chr1:8666072-8672338 FORWARD LENGTH=1732 |