MLOC_848 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.69704 | 9.04361 | 7.67689 | 8.85364 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.54852 | 7.63842 | 9.40913 | 6.67533 |
| INF1 | Young developing inflorescences (5mm) | 13.3065 | 12.5018 | 12.6832 | 11.0105 |
| INF2 | Developing inflorescences (1-1.5 cm) | 12.6083 | 13.0792 | 12.2855 | 14.3623 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.10196 | 7.59948 | 6.03224 | 9.11292 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.55901 | 2.1908 | 1.97664 | 7.53675 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.566 | 10.7037 | 10.4842 | 10.7277 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.39203 | 5.93084 | 4.52194 | 12.6165 |
CDS Structure of MLOC_848
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_848.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g57950.1 |
+1 |
0.0 |
671 |
356/393 (91%) |
13104.m06080 protein dihydroorotate dihydrogenase protein, putative, expressed |
| TAIR PP10 |
AT5G23300.1 |
+1 |
0.0 |
595 |
312/393 (79%) |
| Symbols: PYRD | pyrimidine d | chr5:7847792-7850243 REVERSE LENGTH=460 |
