MLOC_847 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.338783.911391.85733.60003
LEAShoots from the seedlings (10 cm shoot stage)9.080297.76185.395166.47834
INF1Young developing inflorescences (5mm)3.687352.528451.793222.45766
INF2Developing inflorescences (1-1.5 cm)1.155492.047941.068771.70402
ROORoots from the seedlings (10 cm shoot stage)11.004912.988626.390518.1834
NODDeveloping tillers at six leaf stage, 3rd internode0.1181180.1492590.09257890.444271
CAR5Developing grain, bracts removed (5 DPA)0.8122590.7887150.6630970.72608
CAR15Developing grain, bracts removed (15 DPA)2.057831.85371.132744.26445



CDS Structure of MLOC_847






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_847.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_847.1NoneAvailableAvailablecontig_106740 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g22504.1 -3 4e-12 71 48/153 (31%) 13107.m09930 protein NADPH-dependent oxidoreductase, putative
TAIR PP10 ATMG00580.1 -3 3e-76 260 132/140 (94%) | Symbols: NAD4 | NADH dehydrogenase subunit 4 | chrM:161693-169674 FORWARD LENGTH=495