MLOC_8336 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.783639 | 0.531132 | 1.33432 | 0.614312 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.920732 | 1.39413 | 1.00422 | 0.728612 |
INF1 | Young developing inflorescences (5mm) | 0.966295 | 2.27156 | 2.35329 | 1.22139 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.860896 | 0.592116 | 1.28692 | 0.811608 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.14962 | 0.626168 | 1.26385 | 0.927545 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.3365 | 3.16283 | 5.91431 | 8.99806 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.32609 | 1.2858 | 1.76075 | 1.12105 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.255556 | 0.277047 | 0.463476 | 0.568723 |
CDS Structure of MLOC_8336
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8336.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g23810.1 |
-1 |
4e-32 |
124 |
58/139 (42%) |
13109.m02254 protein retrotransposon protein, putative, unclassified |
TAIR PP10 | None | - | - | - | - | - |