MLOC_8336 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7836390.5311321.334320.614312
LEAShoots from the seedlings (10 cm shoot stage)0.9207321.394131.004220.728612
INF1Young developing inflorescences (5mm)0.9662952.271562.353291.22139
INF2Developing inflorescences (1-1.5 cm)0.8608960.5921161.286920.811608
ROORoots from the seedlings (10 cm shoot stage)2.149620.6261681.263850.927545
NODDeveloping tillers at six leaf stage, 3rd internode2.33653.162835.914318.99806
CAR5Developing grain, bracts removed (5 DPA)1.326091.28581.760751.12105
CAR15Developing grain, bracts removed (15 DPA)0.2555560.2770470.4634760.568723



CDS Structure of MLOC_8336






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8336.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8336.1CUST_16935_PI427708080AvailableAvailablecontig_142065 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g23810.1 -1 4e-32 124 58/139 (42%) 13109.m02254 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----