MLOC_8329 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.21258 | 0.256216 | 0.22532 | 0.255346 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
| INF1 | Young developing inflorescences (5mm) | 0 | 0 | 0 | 0 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0646756 | 0.0768965 | 0.163497 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.201462 | 0.0985703 | 0 | 0.215054 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.479459 | 0.287208 | 0.0251832 | 0.522964 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.234695 | 0.073517 | 0.0759727 | 0.129419 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 180.745 | 208.196 | 151.417 | 493.997 |
CDS Structure of MLOC_8329
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8329.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g03810.1 |
-1 |
3e-29 |
107 |
59/80 (74%) |
13103.m00380 protein DEF8 - Defensin and Defensin-like DEFL family, expressed |
| TAIR PP10 |
AT2G02130.1 |
-1 |
5e-25 |
96 |
41/55 (75%) |
| Symbols: PDF2.3, LCR68 | low-molecular-weight cysteine-rich 68 | chr2:540071-540407 FORWARD LENGTH=77 |
