MLOC_8224 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 16.5094 | 13.0521 | 15.202 | 11.3778 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 9.12549 | 10.9081 | 11.1764 | 6.8049 |
| INF1 | Young developing inflorescences (5mm) | 13.4904 | 14.0614 | 14.5361 | 9.38282 |
| INF2 | Developing inflorescences (1-1.5 cm) | 10.4569 | 10.3587 | 13.3129 | 9.68109 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 23.5778 | 16.4234 | 25.4763 | 16.5184 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 13.7306 | 12.402 | 12.0034 | 30.6018 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 18.6997 | 19.4197 | 18.1589 | 14.1227 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.9008 | 11.3654 | 10.1747 | 21.9685 |
CDS Structure of MLOC_8224
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8224.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g40630.1 |
+3 |
9e-127 |
369 |
187/206 (91%) |
13106.m04226 protein SFT2, putative, expressed |
| TAIR PP10 |
AT4G26550.1 |
+3 |
9e-107 |
317 |
157/203 (77%) |
Got1/Sft2-like vescicle transport protein family | chr4:13402755-13404208 REVERSE LENGTH=225 |
