MLOC_8217 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3251802.119720.453299
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.809972000.230492
INF2Developing inflorescences (1-1.5 cm)2.0682.540550.5445691.89039
ROORoots from the seedlings (10 cm shoot stage)00.29128400.177193
NODDeveloping tillers at six leaf stage, 3rd internode00.1421360.3765620.502769
CAR5Developing grain, bracts removed (5 DPA)1.580670.2334431.166650.820207
CAR15Developing grain, bracts removed (15 DPA)0.28962100.4323790.555457



CDS Structure of MLOC_8217






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_8217.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_8217.1CUST_16924_PI427708080AvailableAvailablecontig_141628 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g29730.1 +1 1e-12 63 25/51 (49%) 13110.m02549 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----