MLOC_82121 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains000.08441090.0703505
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)000.05922810.0589035
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)000.1633910.0787878
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0.3679180.1953440.05937240.628825



CDS Structure of MLOC_82121






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_82121.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_82121.1CUST_10957_PI427708083AvailableAvailablecontig_99990 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18220.2 -2 2e-113 341 187/235 (80%) 13103.m02183 protein pyruvate decarboxylase isozyme 2, putative, expressed
TAIR PP10 AT4G33070.1 -2 2e-103 316 176/237 (74%) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607