MLOC_82120 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0000
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)00.037513800.0488717
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)0.0879801000.0359742
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.03942700.0599114
CAR15Developing grain, bracts removed (15 DPA)0.1778470.2386660.04268380.487059



CDS Structure of MLOC_82120






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_82120.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_82120.1CUST_10956_PI427708083AvailableAvailablecontig_99990 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18220.1 -2 0.0 536 272/325 (84%) 13103.m02182 protein pyruvate decarboxylase isozyme 2, putative, expressed
TAIR PP10 AT4G33070.1 -2 2e-176 507 253/325 (78%) Thiamine pyrophosphate dependent pyruvate decarboxylase family protein | chr4:15952519-15954676 REVERSE LENGTH=607