MLOC_82118 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2300650.02115160.1132550.110175
LEAShoots from the seedlings (10 cm shoot stage)000.08018030.110353
INF1Young developing inflorescences (5mm)0.06341710.1521290.06276670.119857
INF2Developing inflorescences (1-1.5 cm)0.1331670.01721180.06579790.0912175
ROORoots from the seedlings (10 cm shoot stage)00.07192880.1656530.239058
NODDeveloping tillers at six leaf stage, 3rd internode0.01376510.064222500.283843
CAR5Developing grain, bracts removed (5 DPA)0.2726850.3152490.3333650.458855
CAR15Developing grain, bracts removed (15 DPA)18.190511.695813.089344.0712



CDS Structure of MLOC_82118






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK376810
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376810CUST_23095_PI427708080NoneNoneNone
MLOC_3866.1NoneAvailableNonecontig_13406 (Not mapped)
MLOC_45694.1NoneAvailableNonecontig_28019 (Not mapped)
MLOC_46723.1NoneAvailableNonecontig_294766 (Mapped)
MLOC_49610.1NoneAvailableNonecontig_345064 (Not mapped)
MLOC_82118.1NoneAvailableAvailablecontig_99964 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----