- Predicted Gene MLOC_82117
MLOC_82117 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.00111 | 6.83753 | 4.75438 | 6.20991 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 203.99 | 444.009 | 331.241 | 311.104 |
| INF1 | Young developing inflorescences (5mm) | 20.054 | 16.9039 | 12.1368 | 15.485 |
| INF2 | Developing inflorescences (1-1.5 cm) | 17.1686 | 16.3792 | 16.7365 | 20.2865 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.2792 | 4.14217 | 6.91176 | 5.87799 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 165.517 | 155.715 | 154.682 | 588.59 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 67.1385 | 55.7006 | 59.8471 | 65.9847 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.64305 | 10.726 | 7.90628 | 23.0007 |
CDS Structure of MLOC_82117
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_82117.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g20700.2 |
-1 |
0.0 |
2410 |
1220/1347 (91%) |
13103.m02483 protein magnesium-chelatase, putative, expressed |
| TAIR PP10 |
AT5G13630.1 |
-1 |
0.0 |
2267 |
1130/1336 (85%) |
| Symbols: GUN5, CCH, CHLH, CCH1, ABAR | magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) | chr5:4387567-4392082 REVERSE LENGTH=1381 |