- Predicted Gene MLOC_82115
MLOC_82115 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_82115_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_82115_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.227285 | 0.791827 | 0.62408 | 0.509107 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.371708 | 0 | 0.588208 | 0.392227 |
INF1 | Young developing inflorescences (5mm) | 0.205485 | 0.40923 | 1.0101 | 0.348921 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.459318 | 0.862474 | 0.210678 | 0.580001 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.4863 | 0 | 0.691425 | 1.03497 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.18128 | 1.02276 | 0.804526 | 2.83626 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.601147 | 0 | 0.223412 | 0.434928 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.211272 | 0.657127 | 0 | 0.955809 |
CDS Structure of MLOC_82115
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_82115.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g33510.2 |
+2 |
2e-43 |
133 |
78/97 (80%) |
13109.m07549 protein hydroxyproline-rich glycoprotein family protein, putative, expressed |
TAIR PP10 |
AT2G33490.1 |
+2 |
3e-24 |
99 |
54/94 (57%) |
hydroxyproline-rich glycoprotein family protein | chr2:14183552-14187666 FORWARD LENGTH=623 |