- Predicted Gene MLOC_82112
MLOC_82112 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.2364 | 4.19805 | 5.29519 | 5.16334 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.99922 | 1.52791 | 2.66718 | 1.73863 |
| INF1 | Young developing inflorescences (5mm) | 7.92184 | 9.45334 | 6.77105 | 6.95491 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.37333 | 6.02076 | 4.77009 | 6.48232 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.79442 | 5.08835 | 4.77449 | 4.93623 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.101187 | 0.179085 | 0.431312 | 0.608767 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.04168 | 6.7045 | 5.58357 | 6.03024 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.783263 | 0.721812 | 0.574714 | 1.74169 |
CDS Structure of MLOC_82112
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_82112.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g02170.2 |
+2 |
4e-79 |
254 |
212/342 (62%) |
13101.m00156 protein expressed protein |
| TAIR PP10 |
AT1G18850.1 |
+2 |
1e-31 |
125 |
73/177 (41%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 40 Blast hits to 40 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:6504928-6506127 REVERSE LENGTH=399 |