MLOC_82072 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2339330.2185110.3350210.273113
LEAShoots from the seedlings (10 cm shoot stage)0.3647360.3975770.6507470.416574
INF1Young developing inflorescences (5mm)0.8006951.459730.7492780.791456
INF2Developing inflorescences (1-1.5 cm)1.329871.361110.4216911.25739
ROORoots from the seedlings (10 cm shoot stage)00.8984651.379990.824155
NODDeveloping tillers at six leaf stage, 3rd internode0.1875850.385520.3871891.19295
CAR5Developing grain, bracts removed (5 DPA)00.36326500.217607
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_82072






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_82072.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_82072.1CUST_10948_PI427708083AvailableAvailablecontig_99735 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g64970.1 -1 8e-12 62 29/32 (91%) 13101.m07011 protein CAMK_CAMK_like.11 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G08590.1 -1 7e-12 62 31/46 (67%) | Symbols: ASK2, SNRK2-1, SNRK2.1, SRK2G | SNF1-related protein kinase 2.1 | chr5:2783537-2785869 FORWARD LENGTH=353