- Predicted Gene MLOC_82028
MLOC_82028 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 31.0862 | 23.4582 | 27.4488 | 23.9715 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 18.303 | 17.8137 | 19.3031 | 13.9247 |
| INF1 | Young developing inflorescences (5mm) | 15.6821 | 21.1611 | 22.7478 | 15.3595 |
| INF2 | Developing inflorescences (1-1.5 cm) | 26.6649 | 19.8365 | 19.3729 | 22.5387 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 41.6478 | 28.1008 | 28.4689 | 30.9982 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 31.5154 | 38.938 | 44.1621 | 114.273 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 28.0448 | 31.4488 | 29.8224 | 26.7382 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 26.1387 | 30.2398 | 27.6715 | 62.9706 |
CDS Structure of MLOC_82028
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_82028.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g51166.1 |
+1 |
4e-134 |
393 |
225/288 (78%) |
13104.m05207 protein expressed protein |
| TAIR PP10 |
AT4G19140.1 |
+1 |
4e-56 |
191 |
105/238 (44%) |
unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:10469830-10471275 FORWARD LENGTH=303 |