- Predicted Gene MLOC_82021
MLOC_82021 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.44842 | 7.04314 | 6.31355 | 6.00664 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.36616 | 1.00265 | 0.714933 | 1.49573 |
| INF1 | Young developing inflorescences (5mm) | 23.4337 | 26.3258 | 24.062 | 19.0473 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.6892 | 29.7492 | 25.9244 | 27.5049 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.08555 | 4.18547 | 5.80402 | 4.54019 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.990097 | 1.32194 | 1.332 | 4.45619 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.74458 | 6.68159 | 7.48653 | 6.24547 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.811995 | 0.412746 | 1.10988 | 1.52526 |
CDS Structure of MLOC_82021
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_82021.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g71960.1 |
+1 |
2e-135 |
408 |
228/344 (66%) |
13101.m07839 protein endonuclease, putative, expressed |
| TAIR PP10 |
AT4G30870.1 |
+1 |
6e-93 |
297 |
163/312 (52%) |
| Symbols: ATMUS81, MUS81 | Restriction endonuclease, type II-like superfamily protein | chr4:15028586-15032461 FORWARD LENGTH=659 |