MLOC_81975 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.451246.687526.336610
LEAShoots from the seedlings (10 cm shoot stage)3.83441.836331.1480
INF1Young developing inflorescences (5mm)20.986223.847121.41060
INF2Developing inflorescences (1-1.5 cm)22.886822.653520.10810
ROORoots from the seedlings (10 cm shoot stage)1.815124.848394.644070
NODDeveloping tillers at six leaf stage, 3rd internode0.8579631.058560.8670030
CAR5Developing grain, bracts removed (5 DPA)10.11138.67729.782640
CAR15Developing grain, bracts removed (15 DPA)4.742354.027264.90760



CDS Structure of MLOC_81975






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81975.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375415NoneNoneNoneNone
MLOC_81975.1CUST_6862_PI427708080AvailableNonecontig_99214 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g17740.1 +2 2e-44 94 46/67 (69%) 13103.m02121 protein transporter, putative, expressed
TAIR PP10 AT3G11320.1 +2 7e-41 86 42/67 (63%) Nucleotide-sugar transporter family protein | chr3:3547017-3548539 REVERSE LENGTH=308