- Predicted Gene MLOC_81975
MLOC_81975 FPKM values
FPKM by Treatment | FPKM by Replicate |
There are no FPKM-by-treatment values calculated for this gene.
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|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.45124 | 6.68752 | 6.33661 | 0 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.8344 | 1.83633 | 1.148 | 0 |
INF1 | Young developing inflorescences (5mm) | 20.9862 | 23.8471 | 21.4106 | 0 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.8868 | 22.6535 | 20.1081 | 0 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.81512 | 4.84839 | 4.64407 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.857963 | 1.05856 | 0.867003 | 0 |
CAR5 | Developing grain, bracts removed (5 DPA) | 10.1113 | 8.6772 | 9.78264 | 0 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.74235 | 4.02726 | 4.9076 | 0 |
CDS Structure of MLOC_81975
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81975.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os03g17740.1 |
+2 |
2e-44 |
94 |
46/67 (69%) |
13103.m02121 protein transporter, putative, expressed |
TAIR PP10 |
AT3G11320.1 |
+2 |
7e-41 |
86 |
42/67 (63%) |
Nucleotide-sugar transporter family protein | chr3:3547017-3548539 REVERSE LENGTH=308 |