MLOC_81970 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains105.969113.349115.367110.55
LEAShoots from the seedlings (10 cm shoot stage)96.784149.801351.983658.6733
INF1Young developing inflorescences (5mm)110.46106.705108.74488.4894
INF2Developing inflorescences (1-1.5 cm)78.260399.313191.359896.3626
ROORoots from the seedlings (10 cm shoot stage)69.547890.558978.045104.421
NODDeveloping tillers at six leaf stage, 3rd internode136.577107.90374.7181356.197
CAR5Developing grain, bracts removed (5 DPA)114.798113.013117.635108.955
CAR15Developing grain, bracts removed (15 DPA)22.302219.528522.965446.9632



CDS Structure of MLOC_81970






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81970.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370309NoneNoneNoneNone
MLOC_81970.1CUST_6861_PI427708080AvailableAvailablecontig_99201 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g50520.1 +1 0.0 1083 544/566 (96%) 13103.m05494 protein dynamin family protein, putative, expressed
TAIR PP10 AT1G14830.1 +1 0.0 934 466/571 (82%) | Symbols: ADL1C, ADL5, DRP1C, DL1C | DYNAMIN-like 1C | chr1:5107699-5111470 REVERSE LENGTH=614