- Predicted Gene MLOC_81957
MLOC_81957 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_81957_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_81957_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 6.43809 | 3.92518 | 3.62892 | 4.40928 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.0662765 | 0 | 0.0534754 |
INF1 | Young developing inflorescences (5mm) | 0.0281925 | 0.0646343 | 0 | 0.0470691 |
INF2 | Developing inflorescences (1-1.5 cm) | 0 | 0.0274054 | 0 | 0.0474948 |
ROO | Roots from the seedlings (10 cm shoot stage) | 12.5602 | 8.16393 | 8.69914 | 9.64753 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.394077 | 0.147008 | 0.0904936 | 0.363069 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.656039 | 1.47114 | 1.06942 | 1.14265 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0240028 | 0 | 0 | 0.0839233 |
CDS Structure of MLOC_81957
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81957.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g14650.1 |
-1 |
3e-133 |
389 |
192/228 (84%) |
13101.m01611 protein expansin precursor, putative, expressed |
TAIR PP10 |
AT1G69530.2 |
-1 |
9e-98 |
297 |
157/226 (69%) |
| Symbols: ATEXPA1, EXP1, AT-EXP1, ATEXP1, ATHEXP ALPHA 1.2, EXPA1 | expansin A1 | chr1:26142034-26143051 FORWARD LENGTH=250 |