MLOC_81928 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains01.326040.47970.968467
LEAShoots from the seedlings (10 cm shoot stage)0.8590870.5540370.8812131.52676
INF1Young developing inflorescences (5mm)0.6469941.408541.396881.12295
INF2Developing inflorescences (1-1.5 cm)0.9049351.385410.5576271.91511
ROORoots from the seedlings (10 cm shoot stage)00.1624370.562720.824964
NODDeveloping tillers at six leaf stage, 3rd internode0.1421470.6963950.4791864.14378
CAR5Developing grain, bracts removed (5 DPA)0.6735570.8938390.7409381.11652
CAR15Developing grain, bracts removed (15 DPA)0.1749290.5360120.52461.51489



CDS Structure of MLOC_81928






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81928.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81928.1CUST_16901_PI427708080AvailableAvailablecontig_99006 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g26510.1 -2 8e-40 143 64/83 (77%) 13102.m02870 protein retrotransposon protein, putative, unclassified
TAIR PP10None-----