MLOC_81925 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.288414.603923.038743.58289
LEAShoots from the seedlings (10 cm shoot stage)1.640020.2803060.1302510.602036
INF1Young developing inflorescences (5mm)9.0213512.06899.238138.76568
INF2Developing inflorescences (1-1.5 cm)10.091311.66879.91511.8503
ROORoots from the seedlings (10 cm shoot stage)1.05023.849482.52073.63236
NODDeveloping tillers at six leaf stage, 3rd internode00.0675010.1086960.336229
CAR5Developing grain, bracts removed (5 DPA)6.303086.273284.287395.62928
CAR15Developing grain, bracts removed (15 DPA)0.3899450.4370390.5650151.04368



CDS Structure of MLOC_81925






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81925.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81925.1CUST_10927_PI427708083AvailableAvailablecontig_9900 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g40290.1 -3 5e-63 208 131/163 (80%) 13104.m03916 protein AAA-type ATPase family protein, putative, expressed
TAIR PP10 AT4G24710.1 -3 5e-49 170 103/153 (67%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:12745752-12748995 REVERSE LENGTH=475