MLOC_81882 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.42037502.33901
LEAShoots from the seedlings (10 cm shoot stage)0.776224000.563445
INF1Young developing inflorescences (5mm)0000.514024
INF2Developing inflorescences (1-1.5 cm)0000.619979
ROORoots from the seedlings (10 cm shoot stage)0001.54612
NODDeveloping tillers at six leaf stage, 3rd internode0001.09723
CAR5Developing grain, bracts removed (5 DPA)0000.241157
CAR15Developing grain, bracts removed (15 DPA)2.5093700.3137653.18707



CDS Structure of MLOC_81882






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81882.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81882.1NoneAvailableAvailablecontig_98683 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g58040.3 -2 3e-49 164 79/87 (91%) 13103.m06374 protein glutamate dehydrogenase protein, putative, expressed
TAIR PP10 AT5G07440.3 -2 9e-49 160 77/87 (89%) | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2356153-2357546 FORWARD LENGTH=309