MLOC_81871 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.9044592.285281.981772.01018
LEAShoots from the seedlings (10 cm shoot stage)0.5679548.330650.856192.76839
INF1Young developing inflorescences (5mm)00.020616100.0232224
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)2.324632.595722.159522.95223
NODDeveloping tillers at six leaf stage, 3rd internode000.006114450.0145652
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_81871






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81871.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK366260NoneNoneNoneNone
MLOC_81871.1CUST_18498_PI427708080AvailableAvailablecontig_98636 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g35350.1 -2 0.0 615 325/560 (58%) 13107.m03615 protein glucan endo-1,3-beta-glucosidase precursor, putative, expressed
TAIR PP10 AT2G05790.1 -2 5e-112 349 196/479 (41%) O-Glycosyl hydrolases family 17 protein | chr2:2199450-2201293 FORWARD LENGTH=472