MLOC_81865 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.781040.9369641.332992.04635
LEAShoots from the seedlings (10 cm shoot stage)16.680534.015849.827924.3512
INF1Young developing inflorescences (5mm)2.041253.237882.204092.85092
INF2Developing inflorescences (1-1.5 cm)1.820771.542731.124562.94181
ROORoots from the seedlings (10 cm shoot stage)0.2858860.1187640.6239351.24907
NODDeveloping tillers at six leaf stage, 3rd internode1.926912.731772.300297.91349
CAR5Developing grain, bracts removed (5 DPA)1.628982.773212.99342.672
CAR15Developing grain, bracts removed (15 DPA)0.5430620.09077440.4949070.970106



CDS Structure of MLOC_81865






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81865.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250161.1NoneNoneNoneNone
MLOC_81865.2CUST_6856_PI427708080AvailableAvailablecontig_98608 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49720.1 -3 6e-60 199 97/105 (92%) 13103.m05403 protein PAP fibrillin family domain containing protein, expressed
TAIR PP10 AT3G26070.1 -3 9e-39 142 68/105 (65%) Plastid-lipid associated protein PAP / fibrillin family protein | chr3:9526904-9528199 FORWARD LENGTH=242