MLOC_81864 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.001612.305572.13471.79405
LEAShoots from the seedlings (10 cm shoot stage)3.235114.407983.619172.93909
INF1Young developing inflorescences (5mm)4.45315.316246.021513.64748
INF2Developing inflorescences (1-1.5 cm)4.540234.872514.647714.28517
ROORoots from the seedlings (10 cm shoot stage)0.9065611.52331.826881.3588
NODDeveloping tillers at six leaf stage, 3rd internode0.978281.045551.15643.02697
CAR5Developing grain, bracts removed (5 DPA)1.955162.59822.599641.88722
CAR15Developing grain, bracts removed (15 DPA)0.6438990.4955460.5907611.10012



CDS Structure of MLOC_81864






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81864.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367264NoneNoneNoneNone
MLOC_81864.2CUST_6855_PI427708080AvailableAvailablecontig_98608 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g49730.2 +1 0.0 800 394/464 (85%) 13103.m05405 protein zinc finger protein, putative, expressed
TAIR PP10 AT2G17900.1 +1 3e-171 529 261/463 (56%) | Symbols: SDG37 | SET domain group 37 | chr2:7773420-7776675 REVERSE LENGTH=480