MLOC_8186 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_8186_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_8186_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.0642788 | 0.053247 | 0.0746535 | 0.0602948 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 0.200922 | 0.186387 | 0.18203 |
INF1 | Young developing inflorescences (5mm) | 0.0879941 | 0.049813 | 0 | 0.0639733 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.171405 | 0.0414756 | 0.213315 | 0.146952 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.0648246 | 0.0496282 | 0.264326 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.711464 | 1.04732 | 0.78922 | 0.824844 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.133003 | 0.30066 | 0.193143 | 0.494715 |
CDS Structure of MLOC_8186
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_8186.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g27140.2 |
+2 |
4e-134 |
387 |
191/228 (84%) |
13109.m02637 protein expressed protein |
TAIR PP10 |
AT2G28230.1 |
+2 |
7e-80 |
247 |
111/220 (50%) |
TATA-binding related factor (TRF) of subunit 20 of Mediator complex | chr2:12037855-12039009 REVERSE LENGTH=219 |