- Predicted Gene MLOC_81790
MLOC_81790 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 2.16904 | 13.8885 | 8.09192 | 6.1204 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 25.8166 | 34.2882 | 28.5005 | 18.0434 |
INF1 | Young developing inflorescences (5mm) | 23.1251 | 22.8265 | 25.7805 | 14.0478 |
INF2 | Developing inflorescences (1-1.5 cm) | 48.9412 | 29.8011 | 31.1712 | 31.0225 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.3712 | 9.50385 | 8.37479 | 6.53902 |
NOD | Developing tillers at six leaf stage, 3rd internode | 11.3132 | 20.4209 | 20.003 | 51.9606 |
CAR5 | Developing grain, bracts removed (5 DPA) | 39.6714 | 33.3068 | 33.7239 | 24.4924 |
CAR15 | Developing grain, bracts removed (15 DPA) | 7.86935 | 7.27168 | 8.49621 | 12.3785 |
CDS Structure of MLOC_81790
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81790.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g14110.1 |
+2 |
1e-24 |
107 |
48/54 (89%) |
13102.m01573 protein aminotransferase, classes I and II, domain containing protein, expressed |
TAIR PP10 |
AT2G30970.2 |
+2 |
7e-20 |
92 |
41/54 (76%) |
| Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430 |