MLOC_81790 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.1690413.88858.091926.1204
LEAShoots from the seedlings (10 cm shoot stage)25.816634.288228.500518.0434
INF1Young developing inflorescences (5mm)23.125122.826525.780514.0478
INF2Developing inflorescences (1-1.5 cm)48.941229.801131.171231.0225
ROORoots from the seedlings (10 cm shoot stage)2.37129.503858.374796.53902
NODDeveloping tillers at six leaf stage, 3rd internode11.313220.420920.00351.9606
CAR5Developing grain, bracts removed (5 DPA)39.671433.306833.723924.4924
CAR15Developing grain, bracts removed (15 DPA)7.869357.271688.4962112.3785



CDS Structure of MLOC_81790






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81790.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81790.1CUST_13438_PI427708083AvailableAvailablecontig_98185 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g14110.1 +2 1e-24 107 48/54 (89%) 13102.m01573 protein aminotransferase, classes I and II, domain containing protein, expressed
TAIR PP10 AT2G30970.2 +2 7e-20 92 41/54 (76%) | Symbols: ASP1 | aspartate aminotransferase 1 | chr2:13179012-13181686 FORWARD LENGTH=430