MLOC_81757 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.310715.53636.205394.61621
LEAShoots from the seedlings (10 cm shoot stage)7.347048.706746.267835.54849
INF1Young developing inflorescences (5mm)6.2657.464867.370144.96051
INF2Developing inflorescences (1-1.5 cm)8.78398.131918.897998.11806
ROORoots from the seedlings (10 cm shoot stage)4.117325.292556.553225.48178
NODDeveloping tillers at six leaf stage, 3rd internode6.131025.743936.0847917.3319
CAR5Developing grain, bracts removed (5 DPA)5.793675.599646.53124.84479
CAR15Developing grain, bracts removed (15 DPA)3.725193.718683.637377.14142



CDS Structure of MLOC_81757






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81757.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK354882NoneNoneNoneNone
MLOC_81757.1CUST_18495_PI427708080AvailableAvailablecontig_98073 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g67170.1 +1 0.0 749 387/512 (76%) 13101.m07284 protein expressed protein
TAIR PP10 AT5G48340.1 +1 1e-125 407 226/515 (44%) unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:19590785-19592487 FORWARD LENGTH=510