MLOC_81745 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains15.709433.478133.156729.6211
LEAShoots from the seedlings (10 cm shoot stage)62.484517.929515.596929.1669
INF1Young developing inflorescences (5mm)25.913423.945522.858120.6679
INF2Developing inflorescences (1-1.5 cm)36.927136.615534.386339.876
ROORoots from the seedlings (10 cm shoot stage)23.73237.817234.963245.1668
NODDeveloping tillers at six leaf stage, 3rd internode63.24863.654537.3553201.209
CAR5Developing grain, bracts removed (5 DPA)17.574517.13317.375617.009
CAR15Developing grain, bracts removed (15 DPA)18.465314.082916.63637.4088



CDS Structure of MLOC_81745






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81745.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249349.1NoneNoneNoneNone
MLOC_81745.1CUST_18494_PI427708080AvailableAvailablecontig_98013 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g25820.1 -2 0.0 1429 760/910 (84%) 13101.m02734 protein respiratory burst oxidase, putative, expressed
TAIR PP10 AT1G09090.2 -2 0.0 972 495/776 (64%) | Symbols: ATRBOHB, RBOHB | respiratory burst oxidase homolog B | chr1:2932743-2936495 FORWARD LENGTH=843