MLOC_81734 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.065563300.1869380.100134
LEAShoots from the seedlings (10 cm shoot stage)0.112629000.122454
INF1Young developing inflorescences (5mm)0.1889710.06130460.2323220.126219
INF2Developing inflorescences (1-1.5 cm)0.5496950.4106180.06907870.382383
ROORoots from the seedlings (10 cm shoot stage)0000
NODDeveloping tillers at six leaf stage, 3rd internode0.05735540.02025210.03573230.0741242
CAR5Developing grain, bracts removed (5 DPA)00.05514050.06937490.0462146
CAR15Developing grain, bracts removed (15 DPA)0.06856530.06865040.1010.137564



CDS Structure of MLOC_81734






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81734.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81734.1CUST_16880_PI427708080AvailableAvailablecontig_97933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g37170.1 +1 2e-49 150 74/156 (47%) 13110.m03370 protein retrotransposon protein, putative, unclassified
TAIR PP10 AT4G29090.1 +1 5e-26 109 46/96 (48%) Ribonuclease H-like superfamily protein | chr4:14333528-14335255 FORWARD LENGTH=575