- Predicted Gene MLOC_81734
MLOC_81734 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_81734_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_81734_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0655633 | 0 | 0.186938 | 0.100134 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.112629 | 0 | 0 | 0.122454 |
INF1 | Young developing inflorescences (5mm) | 0.188971 | 0.0613046 | 0.232322 | 0.126219 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.549695 | 0.410618 | 0.0690787 | 0.382383 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0 | 0 | 0 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.0573554 | 0.0202521 | 0.0357323 | 0.0741242 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.0551405 | 0.0693749 | 0.0462146 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0685653 | 0.0686504 | 0.101 | 0.137564 |
CDS Structure of MLOC_81734
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81734.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os10g37170.1 |
+1 |
2e-49 |
150 |
74/156 (47%) |
13110.m03370 protein retrotransposon protein, putative, unclassified |
TAIR PP10 |
AT4G29090.1 |
+1 |
5e-26 |
109 |
46/96 (48%) |
Ribonuclease H-like superfamily protein | chr4:14333528-14335255 FORWARD LENGTH=575 |