MLOC_81733 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains00.16730100.219783
LEAShoots from the seedlings (10 cm shoot stage)0.309349000.330166
INF1Young developing inflorescences (5mm)0.2562770.3360570.1048220.163501
INF2Developing inflorescences (1-1.5 cm)0.06592630.06154410.1809360.0961606
ROORoots from the seedlings (10 cm shoot stage)0.3020750.088780300.213258
NODDeveloping tillers at six leaf stage, 3rd internode0.1568180.0461370.06969450.149601
CAR5Developing grain, bracts removed (5 DPA)0.0818807000.0722792
CAR15Developing grain, bracts removed (15 DPA)00.096191900.158095



CDS Structure of MLOC_81733






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81733.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81733.1CUST_10905_PI427708083AvailableAvailablecontig_97933 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g42380.1 +1 2e-120 283 136/197 (69%) 13106.m04433 protein retrotransposon protein, putative, unclassified
TAIR PP10 ATMG01250.1 +1 2e-16 75 36/66 (55%) | Symbols: ORF102 | RNA-directed DNA polymerase (reverse transcriptase) | chrM:310514-310882 FORWARD LENGTH=122