- Predicted Gene MLOC_81733
MLOC_81733 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0 | 0.167301 | 0 | 0.219783 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.309349 | 0 | 0 | 0.330166 |
INF1 | Young developing inflorescences (5mm) | 0.256277 | 0.336057 | 0.104822 | 0.163501 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.0659263 | 0.0615441 | 0.180936 | 0.0961606 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.302075 | 0.0887803 | 0 | 0.213258 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.156818 | 0.046137 | 0.0696945 | 0.149601 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.0818807 | 0 | 0 | 0.0722792 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0.0961919 | 0 | 0.158095 |
CDS Structure of MLOC_81733
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81733.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g42380.1 |
+1 |
2e-120 |
283 |
136/197 (69%) |
13106.m04433 protein retrotransposon protein, putative, unclassified |
TAIR PP10 |
ATMG01250.1 |
+1 |
2e-16 |
75 |
36/66 (55%) |
| Symbols: ORF102 | RNA-directed DNA polymerase (reverse transcriptase) | chrM:310514-310882 FORWARD LENGTH=122 |