MLOC_81731 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.963768.65577.323386.81831
LEAShoots from the seedlings (10 cm shoot stage)14.6134.630265.113936.81622
INF1Young developing inflorescences (5mm)5.587014.022863.299333.46167
INF2Developing inflorescences (1-1.5 cm)2.877333.2733.125453.1697
ROORoots from the seedlings (10 cm shoot stage)0.6774391.86461.242661.75568
NODDeveloping tillers at six leaf stage, 3rd internode1.345561.564571.819844.74479
CAR5Developing grain, bracts removed (5 DPA)4.663144.162484.646814.01857
CAR15Developing grain, bracts removed (15 DPA)0.2642410.4487010.2906580.732358



CDS Structure of MLOC_81731






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81731.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81731.1CUST_16879_PI427708080AvailableAvailablecontig_97932 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g40020.1 +1 0.0 1140 561/704 (80%) 13103.m04337 protein PPR repeat containing protein, expressed
TAIR PP10 AT3G53700.1 +1 0.0 779 385/754 (51%) | Symbols: MEE40 | Pentatricopeptide repeat (PPR) superfamily protein | chr3:19900303-19902567 FORWARD LENGTH=754