MLOC_81659 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.384261.212371.038961.1338
LEAShoots from the seedlings (10 cm shoot stage)0.6524730.09545320.4183260.309093
INF1Young developing inflorescences (5mm)0.909741.484991.355041.04182
INF2Developing inflorescences (1-1.5 cm)0.7753490.9295250.9385050.922196
ROORoots from the seedlings (10 cm shoot stage)0.4467651.080480.1416830.873149
NODDeveloping tillers at six leaf stage, 3rd internode0.4867520.650440.8935961.72936
CAR5Developing grain, bracts removed (5 DPA)2.340264.568453.758273.29317
CAR15Developing grain, bracts removed (15 DPA)0.05521470.1072930.02623910.178066



CDS Structure of MLOC_81659






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81659.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81659.1CUST_16870_PI427708080AvailableAvailablecontig_97475 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g40440.1 +3 0.0 589 283/331 (85%) 13102.m04506 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT5G33370.1 +3 2e-167 489 226/329 (69%) GDSL-like Lipase/Acylhydrolase superfamily protein | chr5:12602773-12604670 REVERSE LENGTH=366