MLOC_81614 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.05821350.03497630.02673830.0383319
LEAShoots from the seedlings (10 cm shoot stage)0.5125580.1334470.2229620.241401
INF1Young developing inflorescences (5mm)0.05167460.03592070.1092990.0477625
INF2Developing inflorescences (1-1.5 cm)0.0142083000.0171187
ROORoots from the seedlings (10 cm shoot stage)0.1021330.25573600.318644
NODDeveloping tillers at six leaf stage, 3rd internode0.06512660.04879750.02050680.128139
CAR5Developing grain, bracts removed (5 DPA)0.05377610.04933040.07985680.0481737
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_81614






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81614.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250037.1NoneNoneNoneNone
MLOC_81614.1CUST_6844_PI427708080AvailableAvailablecontig_97250 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g33110.1 +3 0.0 701 384/552 (70%) 13101.m03343 protein receptor-like protein kinase 5 precursor, putative, expressed
TAIR PP10 AT4G08850.1 +3 6e-180 560 343/790 (43%) Leucine-rich repeat receptor-like protein kinase family protein | chr4:5636693-5640496 REVERSE LENGTH=1045