MLOC_81613 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains31.724632.665328.013730.9663
LEAShoots from the seedlings (10 cm shoot stage)19.674711.743716.369513.7441
INF1Young developing inflorescences (5mm)34.658735.427135.635529.4605
INF2Developing inflorescences (1-1.5 cm)24.707831.481325.806230.4646
ROORoots from the seedlings (10 cm shoot stage)27.432126.203520.972731.0065
NODDeveloping tillers at six leaf stage, 3rd internode15.947919.96715.846564.7034
CAR5Developing grain, bracts removed (5 DPA)36.703239.454836.494236.7517
CAR15Developing grain, bracts removed (15 DPA)5.858775.747616.3497713.5243



CDS Structure of MLOC_81613






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81613.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375891NoneNoneNoneNone
MLOC_81613.2CUST_6843_PI427708080AvailableAvailablecontig_97250 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g37000.1 +3 0.0 719 447/496 (90%) 13109.m03660 protein 26S proteasome non-ATPase regulatory subunit 3, putative, expressed
TAIR PP10 AT1G20200.1 +3 0.0 603 370/497 (74%) | Symbols: EMB2719, HAP15 | PAM domain (PCI/PINT associated module) protein | chr1:7001409-7004154 REVERSE LENGTH=488