MLOC_816 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.030451.110680.5850730.946313
LEAShoots from the seedlings (10 cm shoot stage)0.4931390.618960.4712860.412278
INF1Young developing inflorescences (5mm)0.8178310.2915680.2828390.382368
INF2Developing inflorescences (1-1.5 cm)0.248040.4362910.2716540.340806
ROORoots from the seedlings (10 cm shoot stage)2.173633.186169.785423.99036
NODDeveloping tillers at six leaf stage, 3rd internode0.03041660.01032180.01502390.0385312
CAR5Developing grain, bracts removed (5 DPA)0.1722350.2434140.1408680.170029
CAR15Developing grain, bracts removed (15 DPA)0.4236130.5111850.2340850.861801



CDS Structure of MLOC_816






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_816.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_816.1CUST_16867_PI427708080AvailableAvailablecontig_106453 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g33962.1 -3 3e-161 485 255/271 (94%) 13112.m08807 protein uncharacterized tatC-like protein ymf16, putative, expressed
TAIR PP10 ATMG00570.1 -3 9e-142 434 231/275 (84%) | Symbols: ORFX | Sec-independent periplasmic protein translocase | chrM:157491-158351 FORWARD LENGTH=286