MLOC_81592 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.8186810.949110.757410.4473
LEAShoots from the seedlings (10 cm shoot stage)13.07498.513899.750819.21199
INF1Young developing inflorescences (5mm)19.2721.648920.900817.5331
INF2Developing inflorescences (1-1.5 cm)20.096219.92117.566221.1444
ROORoots from the seedlings (10 cm shoot stage)10.905511.858910.276314.2884
NODDeveloping tillers at six leaf stage, 3rd internode6.44310.497710.581734.5146
CAR5Developing grain, bracts removed (5 DPA)18.449916.587917.730716.8474
CAR15Developing grain, bracts removed (15 DPA)19.434116.488217.915140.7347



CDS Structure of MLOC_81592






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81592.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81592.1CUST_16866_PI427708080AvailableAvailablecontig_9707 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os09g39270.1 -2 0.0 802 496/846 (59%) 13109.m03932 protein ZOS9-20 - C2H2 zinc finger protein, expressed
TAIR PP10 AT4G04885.1 -2 5e-22 102 62/177 (35%) | Symbols: PCFS4 | PCF11P-similar protein 4 | chr4:2472083-2475417 FORWARD LENGTH=808