MLOC_81534 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2366450.3542710.3980720.335275
LEAShoots from the seedlings (10 cm shoot stage)1.532183.734754.241432.71714
INF1Young developing inflorescences (5mm)0.01428080.015184100.0141758
INF2Developing inflorescences (1-1.5 cm)0.0129230.01214510.03366310.0246297
ROORoots from the seedlings (10 cm shoot stage)2.315023.070872.547553.5125
NODDeveloping tillers at six leaf stage, 3rd internode0.02321210.06702470.03699320.189982
CAR5Developing grain, bracts removed (5 DPA)0.0763798000.0855006
CAR15Developing grain, bracts removed (15 DPA)0.08452790.015351700.151702



CDS Structure of MLOC_81534






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81534.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK369131NoneNoneNoneNone
MLOC_81534.1CUST_6841_PI427708080AvailableAvailablecontig_96865 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g39730.1 +3 1e-137 429 237/392 (60%) 13105.m04190 protein SAG20, putative, expressed
TAIR PP10 AT3G10980.1 +3 2e-136 426 235/396 (59%) PLAC8 family protein | chr3:3438810-3440501 FORWARD LENGTH=563