MLOC_81476 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains48.479441.639544.064637.8444
LEAShoots from the seedlings (10 cm shoot stage)29.884221.573924.362619.2845
INF1Young developing inflorescences (5mm)55.278856.082154.518939.252
INF2Developing inflorescences (1-1.5 cm)35.24637.333338.493233.5014
ROORoots from the seedlings (10 cm shoot stage)27.473426.006337.73127.4563
NODDeveloping tillers at six leaf stage, 3rd internode7.682819.5351520.758532.5145
CAR5Developing grain, bracts removed (5 DPA)37.016839.73144.551931.2274
CAR15Developing grain, bracts removed (15 DPA)8.248247.917269.0749115.3161



CDS Structure of MLOC_81476






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81476.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81476.1CUST_16849_PI427708080AvailableAvailablecontig_9650 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g24354.1 -2 2e-138 412 203/218 (93%) 13102.m02639 protein pyridoxal-dependent decarboxylase protein, putative, expressed
TAIR PP10 AT3G14390.1 -2 5e-125 377 183/217 (84%) Pyridoxal-dependent decarboxylase family protein | chr3:4806771-4808954 FORWARD LENGTH=484