- Predicted Gene MLOC_81456
MLOC_81456 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 8.91552 | 29.561 | 23.806 | 17.2824 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 31.2501 | 37.68 | 20.599 | 20.9036 |
| INF1 | Young developing inflorescences (5mm) | 62.4441 | 46.022 | 38.0993 | 34.8948 |
| INF2 | Developing inflorescences (1-1.5 cm) | 57.5068 | 71.8001 | 44.1635 | 55.3301 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.12601 | 7.48561 | 8.90746 | 6.61453 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 6.09425 | 4.51815 | 4.97154 | 13.0065 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 22.4411 | 22.5379 | 24.0006 | 17.7798 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 8.85815 | 7.35472 | 5.85078 | 15.0529 |
CDS Structure of MLOC_81456
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81456.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g48010.1 |
+3 |
9e-48 |
180 |
88/139 (63%) |
13102.m05420 protein nuclear matrix constituent protein 1-like, putative, expressed |
| TAIR PP10 |
AT1G67230.1 |
+3 |
3e-16 |
82 |
46/142 (32%) |
| Symbols: LINC1 | little nuclei1 | chr1:25151561-25156032 REVERSE LENGTH=1132 |