MLOC_81456 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.9155229.56123.80617.2824
LEAShoots from the seedlings (10 cm shoot stage)31.250137.6820.59920.9036
INF1Young developing inflorescences (5mm)62.444146.02238.099334.8948
INF2Developing inflorescences (1-1.5 cm)57.506871.800144.163555.3301
ROORoots from the seedlings (10 cm shoot stage)5.126017.485618.907466.61453
NODDeveloping tillers at six leaf stage, 3rd internode6.094254.518154.9715413.0065
CAR5Developing grain, bracts removed (5 DPA)22.441122.537924.000617.7798
CAR15Developing grain, bracts removed (15 DPA)8.858157.354725.8507815.0529



CDS Structure of MLOC_81456






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81456.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81456.3CUST_10865_PI427708083AvailableAvailablecontig_9641 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g48010.1 +3 9e-48 180 88/139 (63%) 13102.m05420 protein nuclear matrix constituent protein 1-like, putative, expressed
TAIR PP10 AT1G67230.1 +3 3e-16 82 46/142 (32%) | Symbols: LINC1 | little nuclei1 | chr1:25151561-25156032 REVERSE LENGTH=1132