MLOC_81454 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.705260.903156.162446.6804
LEAShoots from the seedlings (10 cm shoot stage)42.052832.961536.807330.2736
INF1Young developing inflorescences (5mm)103.119101.70894.002873.2322
INF2Developing inflorescences (1-1.5 cm)72.649889.366477.7878.2921
ROORoots from the seedlings (10 cm shoot stage)25.547446.306140.036246.3585
NODDeveloping tillers at six leaf stage, 3rd internode17.786721.380724.641669.4966
CAR5Developing grain, bracts removed (5 DPA)67.012866.972869.248357.1785
CAR15Developing grain, bracts removed (15 DPA)18.406715.93116.510433.0219



CDS Structure of MLOC_81454






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81454.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81454.2CUST_16848_PI427708080AvailableAvailablecontig_96400 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g64080.1 -1 0.0 1889 964/1068 (90%) 13103.m07113 protein retrotransposon protein, putative, Ty1-copia subclass
TAIR PP10 AT5G17020.1 -1 0.0 1754 888/1073 (83%) | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | exportin 1A | chr5:5594904-5602467 FORWARD LENGTH=1075