- Predicted Gene MLOC_81445
MLOC_81445 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_81445_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 6.2164 | 5.03158 | 5.56933 | 5.56862 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 5.76576 | 2.537 | 4.09942 | 3.67218 |
INF1 | Young developing inflorescences (5mm) | 17.7726 | 16.5046 | 17.7937 | 14.7215 |
INF2 | Developing inflorescences (1-1.5 cm) | 14.0881 | 20.4735 | 16.6423 | 19.2002 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.34102 | 5.45029 | 3.21828 | 5.95607 |
NOD | Developing tillers at six leaf stage, 3rd internode | 2.13779 | 2.92232 | 3.95075 | 9.98786 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.46616 | 7.01831 | 6.30643 | 6.47084 |
CAR15 | Developing grain, bracts removed (15 DPA) | 8.814 | 8.17951 | 7.87202 | 19.6238 |
CDS Structure of MLOC_81445
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81445.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g40740.1 |
-1 |
3e-76 |
249 |
154/212 (73%) |
13106.m04245 protein expressed protein |
TAIR PP10 |
AT5G50350.1 |
-1 |
5e-19 |
88 |
64/191 (34%) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | chr5:20498697-20501611 REVERSE LENGTH=584 |