MLOC_81410 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains26.471843.572437.918532.2768
LEAShoots from the seedlings (10 cm shoot stage)40.0838.636739.706430.6402
INF1Young developing inflorescences (5mm)69.08168.461469.479648.9594
INF2Developing inflorescences (1-1.5 cm)82.686371.336578.949272.106
ROORoots from the seedlings (10 cm shoot stage)25.793338.476426.565937.2087
NODDeveloping tillers at six leaf stage, 3rd internode37.523740.910847.6379126.005
CAR5Developing grain, bracts removed (5 DPA)48.681150.566953.247441.1443
CAR15Developing grain, bracts removed (15 DPA)31.924936.075935.746562.4579



CDS Structure of MLOC_81410






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81410.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81410.1CUST_10857_PI427708083AvailableAvailablecontig_9611 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g09120.1 -2 8e-171 494 234/296 (79%) 13112.m00966 protein mRNA-capping enzyme, putative, expressed
TAIR PP10 AT3G09100.2 -2 3e-120 363 182/307 (59%) mRNA capping enzyme family protein | chr3:2788435-2792913 REVERSE LENGTH=672