- Predicted Gene MLOC_81360
MLOC_81360 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_81360_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_81360_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 13.5175 | 9.32272 | 11.06 | 9.80534 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.58854 | 5.48004 | 8.62006 | 5.70645 |
INF1 | Young developing inflorescences (5mm) | 21.8886 | 26.0453 | 25.9683 | 20.7613 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.3911 | 32.0321 | 32.5993 | 32.698 |
ROO | Roots from the seedlings (10 cm shoot stage) | 11.787 | 12.1915 | 12.6173 | 11.1277 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.90221 | 9.3219 | 13.5959 | 22.9549 |
CAR5 | Developing grain, bracts removed (5 DPA) | 18.0886 | 20.0025 | 17.2493 | 17.1519 |
CAR15 | Developing grain, bracts removed (15 DPA) | 4.41354 | 3.82654 | 4.14795 | 9.8925 |
CDS Structure of MLOC_81360
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81360.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g55210.1 |
+3 |
1e-14 |
78 |
46/60 (77%) |
13104.m05721 protein chloride channel protein, putative, expressed |
TAIR PP10 |
AT5G33280.1 |
+3 |
1e-12 |
71 |
32/45 (71%) |
Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765 |