MLOC_81360 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.51759.3227211.069.80534
LEAShoots from the seedlings (10 cm shoot stage)9.588545.480048.620065.70645
INF1Young developing inflorescences (5mm)21.888626.045325.968320.7613
INF2Developing inflorescences (1-1.5 cm)28.391132.032132.599332.698
ROORoots from the seedlings (10 cm shoot stage)11.78712.191512.617311.1277
NODDeveloping tillers at six leaf stage, 3rd internode7.902219.321913.595922.9549
CAR5Developing grain, bracts removed (5 DPA)18.088620.002517.249317.1519
CAR15Developing grain, bracts removed (15 DPA)4.413543.826544.147959.8925



CDS Structure of MLOC_81360






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81360.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81360.2CUST_10849_PI427708083AvailableAvailablecontig_95893 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g55210.1 +3 1e-14 78 46/60 (77%) 13104.m05721 protein chloride channel protein, putative, expressed
TAIR PP10 AT5G33280.1 +3 1e-12 71 32/45 (71%) Voltage-gated chloride channel family protein | chr5:12549280-12552305 FORWARD LENGTH=765