MLOC_81297 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.434312.371311.79239.98973
LEAShoots from the seedlings (10 cm shoot stage)0.3817910.6639950.4346430.370733
INF1Young developing inflorescences (5mm)0.9881351.278831.018880.788965
INF2Developing inflorescences (1-1.5 cm)1.340490.3351591.640740.921209
ROORoots from the seedlings (10 cm shoot stage)3.460784.119944.490054.04337
NODDeveloping tillers at six leaf stage, 3rd internode0.2742340.3478880.2807080.982958
CAR5Developing grain, bracts removed (5 DPA)1.162230.9965111.492210.949322
CAR15Developing grain, bracts removed (15 DPA)2.110451.596682.119313.71743



CDS Structure of MLOC_81297






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81297.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_81297.1CUST_16832_PI427708080AvailableAvailablecontig_95618 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g48040.1 -2 0.0 655 319/402 (79%) 13105.m05094 protein MATE efflux family protein, putative, expressed
TAIR PP10 AT1G15150.1 -2 4e-150 446 208/386 (54%) MATE efflux family protein | chr1:5212674-5214723 FORWARD LENGTH=487