MLOC_81243 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.38551.244071.312911.34472
LEAShoots from the seedlings (10 cm shoot stage)0.2329590.5910330.3924330.366254
INF1Young developing inflorescences (5mm)0.3274720.6170460.2500810.376025
INF2Developing inflorescences (1-1.5 cm)0.8671880.4138240.4168560.642495
ROORoots from the seedlings (10 cm shoot stage)0.6789470.9560060.5566331.07382
NODDeveloping tillers at six leaf stage, 3rd internode0.3758360.05052650.1848240.240448
CAR5Developing grain, bracts removed (5 DPA)1.557121.532751.619971.5471
CAR15Developing grain, bracts removed (15 DPA)4045.984671.424033.3410681.3



CDS Structure of MLOC_81243






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81243.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250356.1NoneNoneNoneNone
MLOC_81243.1CUST_6832_PI427708080AvailableAvailablecontig_95296 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g11510.1 -1 5e-22 93 54/120 (45%) 13107.m01188 protein RAL6 - Seed allergenic protein RA5/RA14/RA17 precursor, expressed
TAIR PP10None-----