MLOC_81236 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.418617.441614.192716.1614
LEAShoots from the seedlings (10 cm shoot stage)11.949110.085816.42049.86056
INF1Young developing inflorescences (5mm)24.486325.415526.383720.4976
INF2Developing inflorescences (1-1.5 cm)17.584417.20115.618217.6579
ROORoots from the seedlings (10 cm shoot stage)17.834816.662715.849817.5437
NODDeveloping tillers at six leaf stage, 3rd internode2.185022.751297.3860910.1998
CAR5Developing grain, bracts removed (5 DPA)12.675814.482513.251512.4015
CAR15Developing grain, bracts removed (15 DPA)6.147236.829425.2711214.1514



CDS Structure of MLOC_81236






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_81236.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362270NoneNoneNoneNone
MLOC_81236.1CUST_6830_PI427708080AvailableAvailablecontig_95251 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g51390.1 +2 0.0 789 406/474 (86%) 13101.m05362 protein mitochondrial-processing peptidase subunit, mitochondrial precursor, putative, expressed
TAIR PP10 AT3G02090.1 +2 2e-178 521 271/455 (60%) | Symbols: MPPBETA | Insulinase (Peptidase family M16) protein | chr3:365624-368526 FORWARD LENGTH=531