- Predicted Gene MLOC_81215
MLOC_81215 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 6.94528 | 5.88391 | 5.62728 | 6.05051 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 56.5856 | 121.415 | 124.705 | 81.0882 |
| INF1 | Young developing inflorescences (5mm) | 4.12967 | 4.93142 | 4.4723 | 3.95549 |
| INF2 | Developing inflorescences (1-1.5 cm) | 3.61351 | 4.60596 | 3.94536 | 4.60045 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.6418 | 14.1196 | 9.32885 | 16.1284 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 32.9473 | 37.3822 | 54.1513 | 120.686 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.6764 | 11.3264 | 9.54604 | 10.8014 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.80079 | 5.28097 | 4.72361 | 11.9949 |
CDS Structure of MLOC_81215
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81215.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g27760.1 |
+1 |
3e-82 |
251 |
111/126 (88%) |
13106.m02855 protein peptide methionine sulfoxide reductase msrB, putative, expressed |
| TAIR PP10 |
AT1G53670.1 |
+1 |
5e-76 |
233 |
103/127 (81%) |
| Symbols: MSRB1, ATMSRB1 | methionine sulfoxide reductase B 1 | chr1:20036687-20038074 FORWARD LENGTH=202 |
