- Predicted Gene MLOC_81213
MLOC_81213 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 9.94018 | 18.2042 | 17.0415 | 16.0639 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 25.0316 | 25.5017 | 25.0744 | 21.9113 |
| INF1 | Young developing inflorescences (5mm) | 31.4614 | 34.6378 | 33.4542 | 27.907 |
| INF2 | Developing inflorescences (1-1.5 cm) | 44.0596 | 44.8104 | 38.1365 | 47.1105 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.1609 | 23.8905 | 18.6782 | 27.7663 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 14.6089 | 19.1196 | 18.8595 | 65.023 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 38.9435 | 35.6797 | 37.7981 | 36.2755 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.9067 | 17.9987 | 17.3731 | 40.952 |
CDS Structure of MLOC_81213
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_81213.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g19660.1 |
+2 |
0.0 |
1856 |
980/1267 (77%) |
13106.m02100 protein WD domain, G-beta repeat domain containing protein, expressed |
| TAIR PP10 |
AT3G13300.2 |
+2 |
0.0 |
1051 |
608/1263 (48%) |
| Symbols: VCS | Transducin/WD40 repeat-like superfamily protein | chr3:4304085-4309949 FORWARD LENGTH=1309 |